Documentation: Allen Mouse Brain Atlas
Document |
Description |
Processes and procedures used to perform ISH |
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Design and implementation of the Informatics Data Pipeline (IDP) |
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Overview of the sagittal and coronal Allen Reference Atlases |
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Overview of the sagittal and coronal Allen Reference Atlases |
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Overview of the design and implementation of the Allen Mouse Common Coordinate Framework |
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Explanation of the informatics methods used to create the fine structure annotations |
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Recognition of collaborators and others who provided assistance |
Supplemental Data: Allen Mouse Brain Atlas
Document |
Description |
Quality control standards for high-throughput RNA in situ hybridization data generation |
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Methods for validating the data |
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Overview of the Anatomic Gene Expression Atlas (AGEA) |
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PDF Article of the Sleep Study Results |
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Mouse Strains Study |
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Compilations of neuroanatomic and gene expression characteristics for key brain regions or nuclei |
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Technical white paper detailing the methods used to manually annotate the expression patterns of genes in the mouse somatosensory cortex |
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The 1000 most requested genes were analyzed as a validation of the ISH data |
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An updated list of the 1000 most requested genes that were analyzed as a validation of the ISH data |