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  1. Brain Explorer

    with 64MB RAM Screen: 1024x768, 32-bit true color Hard Disk: 200MB free space Note: Brain Explorer is known to work with the following video chipsets: nVidia … http://www.brain-map.org/BrainExplorer2/BrainExplorer2.msi. Double-click the downloaded BrainExplorer2.msi file and follow the prompts. Mac The Mac version of Brain Explorer
    Allen Human Brain AtlasJan 30, 2017
  2. VisualCoding_Overview.pdf

    -frame (A) and head-frame clamp (B). A printed head-plate was made from an acrylic photopolymer [the white part in (A) but produced in a black material] with a well … clamping in the instruments. Head-frames were assembled in a jig to ensure uniform offset between the center of the well and the reference surfaces of the clamp
    Allen Brain Observatory / … / DocumentationSep 27, 2018
  3. Brain Explorer

    AGP or PCI Express with 64MB RAM • Screen: 1024x768, 32-bit true color • Hard Disk: 200MB free space Note: Brain Explorer is known to work … is available here http://www.brain-map.org/BrainExplorer2/BrainExplorer2.msi. Double-click the downloaded BrainExplorer2.msi file and follow the prompts. Mac
    Allen Mouse Brain AtlasJan 30, 2017
  4. CellTypes_Morph_Overview.pdf

    the Mozak extension of Vaa3D. Quantitative morphological feature measurements were extracted from each final reconstruction data file. These measurements … floating sections (30 µm) were stained in 24-well plate inserts. Sections were washed in PBS-Tween 20 (0.05%) and endogenous peroxidase activity was blocked using
    Allen Cell Types Database / … / DocumentationJun 06, 2018
  5. Allen Brain Observatory - Overview

    upon request. Each experiment contains three movie files of approximately 60 GB each. We ask that anyone requesting movies provide one or more hard drives with sufficient capacity to store the files and a shipping number from your organization for return. These will be returned after file transfer is complete. Data
    Allen Brain ObservatoryJun 07, 2017
  6. Brain Explorer

    : Brain Explorer is known to work with the following video chipsets: nVidia GeForce 9400/9600, nVidia Quadro FX 1800/3800/5600, AMD Radeon 9600, AMD Radeon HD 3200 … BrainExplorer2.msi file and follow the prompts. Mac Systems requirement: minimum configuration • Operating System: OS X 10.6.8 • CPU: Intel 1.8GHz • System Memory
  7. VisualCoding_VisualStimuli.pdf

    characterize the temporal and spatial response profiles, allowing us to, for example, identify a cell’s preferred orientation as well as its preferred spatial … template in the NWB files do not get displayed on the monitor following this warping, particularly in the corners of the images and movies. The Software Development
    Allen Brain Observatory / … / DocumentationJun 12, 2017
  8. API

    expression values can be downloaded in several ways: From the web application Download page http://human.brain-map.org/static/download. Each zip file contains … Download an "raw" Aglient output file for one sample using the download-link http://api.brain-map.org/api/v2/well_known_file_download/3436(warning: large file
    Allen Human Brain AtlasSep 27, 2018
  9. Microarray Data

    separate files: 1) a Columns.csv file that lists the column headers with associated metadata for each sample, 2) a Probes.csv file that lists the row headers with associated metadata for each probe, and 3) an Expression.csv file that provides a matrix of the expression values for each data point. The column headers
    Allen Human Brain AtlasMar 02, 2017
  10. EphysOverview.pdf

    conditions such as electrode resistance, tight seal resistance, and series resistance, as well as more granular details such as bath temperature and amplifier … concentration (substituted with NMDG, Zhao et al., 2011) and elevated magnesium concentrations as well as N-acetyl-L-cysteine and sodium ascorbate to reduce
    Allen Cell Types Database / … / DocumentationOct 16, 2017