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DOWNLOADING 3-D PROJECTION GRID DATA

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Image Added Download 3-D expression grid data packaged into a compressed archive file (.zip).

Prototype

No Format

http://api.brain-map.org/grid_data/download/[SectionDataSet.id]&include=[images]

Examples

Download the 200um density volume for the Mouse Brain Atlas SectionDataSet 69816930:

No Format

http://api.brain-map.org/grid_data/download_file/69816930

Download the 200um energy and intensity volumes for Mouse Brain Atlas SectionDataSet 69816930:

No Format

http://api.brain-map.org/grid_data/download_file/183282970?include=energy,intensity

Download the energy volume for the Mouse Brain Atlas' coronal Adora2a experiment.

    First, search for relevant experiments' IDs (SectionDataSets):

No Format

http://api.brain-map.org/api/v2/data/query.xml?criteria=
model::SectionDataSet,
rma::criteria,[failed$eq'false'],products[abbreviation$eq'Mouse'],plane_of_section[name$eq'coronal'],genes[acronym$eq'Adora2a']

    Then, download the energy volume for each of the experiments' IDs:

No Format

http://api.brain-map.org/grid_data/download/72109410?image=energy

Parameters

filename

Integer

ID of the desired SectionDataSet.

image

String

Explicitly choose the desired image volume. Valid volumes are energy and density. An additional volume of injection is available for projection SectionDataSets. 

resolution

Integer

For projection data, available resolutions are 10, 25, 50, and 150 (in microns). For adult mouse gene expression SectionDataSets, only 200um resolution data is available and will be returned regardless of the input value.

Response

For Mouse Projection data, the response will be a single 32-big floating point Nrrd image named for the requested image type and resolution.