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From the API, detailed information about cells can be obtained using RMA queries.

Anchor
:Examples
examples
examples

Examples:

  • All cells in the "Mouse Cell Types" Product
    No Format
    http://api.brain-map.org/api/v2/data/query.xml?criteria=
    model::Specimen
    ,rma::criteria,[is_cell_specimen$eq'true'],products[name$eq'Mouse Cell Types']
    ,rma::include,structure,donor(transgenic_lines),specimen_tags,cell_soma_locations
    ,rma::options[num_rows$eqall]
    
  • All cells tagged with 'dendrite type - spiny'
    No Format
    http://api.brain-map.org/api/v2/data/query.xml?criteria=
    model::Specimen
    ,rma::criteria,[is_cell_specimen$eq'true'],products[name$eq'Mouse Cell Types']
    ,rma::include,
    structure,donor(transgenic_lines),specimen_tags[name$eq'dendrite type - spiny'],cell_soma_locations
    ,rma::options[num_rows$eqall]
    
  • All cells annotated to be in layer 4
    No Format
    http://api.brain-map.org/api/v2/data/query.xml?criteria=
    model::Specimen
    ,rma::criteria,[is_cell_specimen$eq'true'],products[name$eq'Mouse Cell Types']
    ,rma::include,structure[name$il'*layer 4*'],donor(transgenic_lines),specimen_tags,cell_soma_locations
    ,rma::options[num_rows$eqall]
    

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