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Atlas ID

 

Atlas Name

Image Type

Ontology

StructureGraph ID

GraphicGroupLabels

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="695847f46b8a29a7-f92b176a-4d514fd0-a816be6f-47bbfb60f3a72207f571cfe3"><ac:plain-text-body><![CDATA[

[1

http://atlas.brain-map.org/atlas?atlas=1]

!P56_Coronal.png

width=32!

"Mouse, P56,  Coronal"

"Atlas - Adult Mouse"

"Mouse Brain Atlas"

1

[28,159226751]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0c7808ddec4d8d3e-4ff6e652-42434911-9c0ba9c8-50f90f4384e7d4d4c208d35e"><ac:plain-text-body><![CDATA[

[2

http://atlas.brain-map.org/atlas?atlas=2]

!P56_Sagittal.png

width=32!

"Mouse, P56, Sagittal"

"Atlas - Adult Mouse"

"Mouse Brain Atlas"

1

[28,159226751]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="25c76e6c2a803854-60712a43-41444cce-9288a107-5f72fb1c915ca885c59d34e3"><ac:plain-text-body><![CDATA[

[181276165

http://atlas.brain-map.org/atlas?atlas=181276165]

!DevMouse_P56.jpg

width=32!

"Developing Mouse, P56"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32,167675952]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="86738851ddfcc0b5-9d4e0a8c-4ba74f6e-bde49fce-174604818f26229cbaf91618"><ac:plain-text-body><![CDATA[

[181276164

http://atlas.brain-map.org/atlas?atlas=181276164]

!DevMouse_P14.jpg

width=32!

"Developing Mouse, P14"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="89be7e16daa693ba-f74b7a28-4feb404a-83dcb61e-c3e2436faebeec1170cc70cd"><ac:plain-text-body><![CDATA[

[181276162

http://atlas.brain-map.org/atlas?atlas=181276162]

!DevMouse_P4.jpg

width=32!

"Developing Mouse, P4"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="117b1cfe6953cdc7-e3f7d9bb-45474bb6-8d1689c2-5b0fd7354f75072f095468a0"><ac:plain-text-body><![CDATA[

[181276160

http://atlas.brain-map.org/atlas?atlas=181276160]

!DevMouse_E18pt5.jpg

width=32!

"Developing Mouse, E18.5"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a4254e6599215ccc-4a2e97a6-449f41c5-a50095e5-28cd5ce0ce36b1b233f2eae8"><ac:plain-text-body><![CDATA[

[181276151

http://atlas.brain-map.org/atlas?atlas=181276151]

!DevMouse_E15pt5.jpg

width=32!

"Developing Mouse, E15.5"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="971a6922225640b5-ffe74167-437a406e-9c02854e-aa36609e0572506b84e5b80d"><ac:plain-text-body><![CDATA[

[181276130

http://atlas.brain-map.org/atlas?atlas=181276130]

!DevMouse_E13pt5.jpg

width=32!

"Developing Mouse, E13.5"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="d5d2ffb1b43c6332-f82c6679-4b694594-90fe8f86-f21bea9ed883f646a497d91f"><ac:plain-text-body><![CDATA[

[181275741

http://atlas.brain-map.org/atlas?atlas=181275741]

!DevMouse_E11pt5.jpg

width=32!

"Developing Mouse, E11.5"

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32,126768961]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="766d577f0a2157c5-984c5056-4e6f4c92-9bd189a9-b23d184898fa8c2aeb134dcb"><ac:plain-text-body><![CDATA[

[138322605

http://atlas.brain-map.org/atlas?atlas=138322605]

!cortex_gyral.png

width=25!

"Human, 34 years, Cortex - Gyral"

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31,113753815,113753816,141667008]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ba99220b5dd208be-0014010b-49904493-988d9a9e-a756e68c64a94f2be29f385b"><ac:plain-text-body><![CDATA[

[265297126

http://atlas.brain-map.org/atlas?atlas=265297126]

!cortex_brodmann.png

width=25!

"Human, 34 years, Cortex - Mod. Brodmann"

"Atlas - Developing Human Brodmann"

"Developing Human Brain Atlas"

16

[31,113753816,141667008,265297118]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="440e02ff89c8a0c0-4dde3736-460e43f4-afc18e64-90379dd263de55d36b45ec04"><ac:plain-text-body><![CDATA[

[3

http://atlas.brain-map.org/atlas?atlas=3]

!Human_21pcw.jpg

width=25!

"Human, 21 pcw"

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31,113753816,141667008]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="94f237a876a04f03-dbfd0ec2-42dc46e0-8c5584b3-d4cbbd93f4a8e619a6af35ca"><ac:plain-text-body><![CDATA[

[287730656

http://atlas.brain-map.org/atlas?atlas=3]

!Human_21pcw_Brainstem.jpg

width=25!

"Human, 21 pcw - Brainstem"

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31,141667008]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="76216478705b3c32-21303a9e-4ec044d3-ba0d9346-d2d2f7fb74921568b2b22c16"><ac:plain-text-body><![CDATA[

[138322603

http://atlas.brain-map.org/atlas?atlas=138322603]

!Human_15pcw.jpg

width=20!

"Human, 15 pcw"

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31,141667008]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7c2c1e7c1984efc2-5b40f58b-4fc14d28-bb868bdf-42e86599d2fee76b391ff646"><ac:plain-text-body><![CDATA[

[265297125

http://atlas.brain-map.org/atlas?atlas=265297125]

!hba_guide.png

width=25!

"Human Brain Atlas Guide "

"Atlas - Human"

"Human Brain Atlas"

10

[265297119,266932194,266932196,266932197]

]]></ac:plain-text-body></ac:structured-macro>

...

Ontology ID

Ontology Name

StructureGraph
ID

Uses

1

"Mouse Brain Atlas"

1

Mouse Brain, Mouse Connectivity

  • Reference Atlases
  • Brain Explorer, AGEA
  • Informatics quantification of ISH data
  • Informatics quantification of projection data
  • Search services

12

"Developing Mouse Brain Atlas"

17

Developing Mouse Brain

  • Reference Atlases
  • Brain Explorer, AGEA
  • Informatics quantification of ISH data
  • Search services

7

"Human Brain Atlas"

10

Human Brain

  • Annotation of microarray Sampling Sites
  • Brain Explorer
  • Heatmap and search services
  • "Hot spot" annotation of ISH data
  • Human Brain Atlas Guide

11

"Developing Human Brain Atlas"

16

Developing Human Brain

  • Reference Atlases
  • Annotation of RNA-sequencing and microarray Sampling Sites
  • Heatmap and search services
  • "Hot spot" annotation of ISH data

4

"Non-Human Primate Brain Atlas"

8

Non-Human Primate

  • Annotation of microarray Sampling Sites
  • Heatmap and search services
  • "Hot spot" annotation of ISH data

10

"Glioblastoma"

15

Glioblastoma, Human Glioblastoma RNASeq

  • Annotation of tumor features on H&E and ISH data
  • Annotation of RNA-Seq sampling sites

From the API, Structure and Ontology information can be downloaded in various formats.

...