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actionbehavior
left clickselect a structure or data set
left click + dragrotate the camera
mousewheelzoom in / out
right click + dragpan the camera

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View Brain Anatomy

The Web Viewer displays anatomical structures defined as part of the Allen Mouse Common Coordinate Framework.  Briefly, this space is a population average of 1675 P56 mouse brains with 662 structures drawn in 3D. See the technical whitepaper for more details.  

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Open coronal, sagittal, and horizontal slice planes by clicking the "toggle slice planes" button. Each plane displays the Common Coordinate Framework's average brain colored to indicate structural boundaries. Drag the colored arrows to move the slice planes.

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View Axonal Projections from the Allen Mouse Connectivity Atlas

The Allen Mouse Brain Connectivity Atlas provides links to open the Web Viewer and visualize approximate projection pathways for a data set of interest. You can open the 3D viewer from three places in the Atlas:

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