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   Documentation: Mouse Brain Atlas
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{td}{*}Document{*}{td}{td}{*}Description{*}{td}
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{td}In Situ Hybridization {td}{td}Processes and procedures used to perform ISH{td}
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{td}Informatics Data Processing {td}{td}Design and implementation of the Informatics Data Pipeline (IDP){td}
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{td}Reference Atlases {td}{td}Overview of the sgittal and coronal Allen Reference Atlases{td}
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{td}Fine Structure Annotation {td}{td}Explanation of the informatics methods used to create the fine structure annotations{td}
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{td}Acknowledgement of Collaborators {td}{td}Recognition of collaborators and others who provided assistance{td}
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   Supplemental Data: Mouse Brain Atlas
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{td}{*}Document{*}{td}{td}{*}Description{*}{td}
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{td}Overview of Controls {td}{td}Overview of the generation of the Allen Mouse Brain Atlas{td}
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{td}ISH Platform Controls {td}{td}Quality control standards for high-throughput RNA in situ hybridization data generation{td}
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{td}Cross Platform Validation{td}{td}Methods for validating the data{td}
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{td}AGEA User Guide{td}{td}Overview of the Anatomic Gene Expression Atlas (AGEA){td}
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{td}FSA Reports {td}{td}Compilations of neuroanatomic and gene expression characteristics for key brain regions or nuclei{td}
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{td}Somatosensory Annotation {td}{td}Technical white paper detailing the methods used to manually annotate the expression patterns of genes in the mouse somatosensory cortex{td}
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{td}SomatosensoryAnnotation.xls {td}{td}Spreadsheet containing the somatosensory annotations{td}
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{td}Comparison of the Top 1000 Genes {td}{td}The 1000 most requested genes were analyzed as a validation of the ISH data{td}
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{td}Comparison of the Top 1000 Genes (Oct 2010) {td}{td}An updated list of the 1000 most requested genes that were analyzed as a validation of the ISH data{td}
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