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Cell Types Aging, Dementia and TBI Allen Brain Observatory

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Projection Dataset

This tab allows you to browse an image database of axonal projections labeled by viral (rAAV) tracers and visualized using 2-photon blockface imaging. The viral signal was collected in the green channel, while background fluorescence was collected in the red channel to give anatomical context.

To search this dataset, browse and select from a list of primary injections sites (approximately 40 20 sites for the November 2011 release). Selecting an injection site will return a list of experiments. This list outlines the experiment ID, Structure Name, Mouse Strain, Sex, and Age.

Clicking on an experiment ID will launch a contact sheet viewer.

Clicking on individual images on the contact sheet will launch a Single High Resolution Image Viewer (SIV). Within the SIVImage Viewer, the contrast and brightness can be adjusted and the individual color channels can be turned on and off by moving both range sliders in a channel to zero.

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