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Allen Brain Atlas API

This is the online help for the ALLEN Brain Atlas API.

The Allen Institute for Brain Science offers access to its published data through an application programming interface (API). The API, documentation, sample applications, and 2012 Allen Brain Atlas Hackathon materials are made available to the community under the Allen Institute's Terms of Use in hopes of facilitating discovery.

Available Data and Services:
Mouse Brain (http://)
  • Genome-wide coverage
  • Comprehensive anatomic coverage
  • Microscopic resolution down to the cellular level
  • NeuroBlast search for genes with similar spatial expression patterns
Developing Mouse Brain
Brain ExplorerConnectivity
Human Brain
  • Coronal and sagittal plates
  • High-resolution Nissl images
  • Structure ontology
Developing Human Brain
Developing Human
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