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  • Find Structure ID for "thalamus" (id = 10390)
    Code Block,
    rma::criteria,[name$il'thalamus'],ontology[name$eq'Developing Human Brain Atlas'],
  • Find Structure ID for "transient structures of forebrain" (id = 10506)
    Code Block,
    rma::criteria,[name$il'transient structures of forebrain'],ontology[name$eq'Developing Human Brain Atlas'],
  • Use Structure IDs as parameters to the connected service
    Code Block
  • Visualize the same search result in the Web application 

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Figure: Screenshot of top returns of a differential search for genes with higher expression in the thalamus than the cerebral cortextransient structures of forebrain. Z-score heatmap shows enrichment (red) in the thalamus (structure color: light green) compare to other brain regions.