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Please note that multiple line example RMA queries on this page represent spaces enclosed in quotation marks with the "+" character to make the examples compatible with some browsers.

Mouse Brain

All Mouse Brain ISH experiments

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Code Block
http://api.brain-map.org/api/v2/data/query.xml?criteria=
model::SectionDataSet,
rma::criteria,[failed$eqfalse],products[abbreviation$eq'Mouse'],treatments[name$eq'ISH'],
rma::include,genes,specimen(donor(age)),plane_of_section,section_images
&num_rows=1050&start_row=0

Sagittal Mouse Brain ISH

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experiments for

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Adora2a

Code Block
http://api.brain-map.org/api/v2/data/query.xml?criteria=
model::SectionDataSet,
rma::criteria,[id$eq73931410failed$eq'false'],products[abbreviation$eq'Mouse'],plane_of_section[name$eq'sagittal'],genes[acronym$eq'Adora2a']

Images for sagittal Mouse Brain ISH Adora2a experiment 70813257

Code Block

http://api.brain-map.org/api/v2/data/query.xml?criteria=
model::SectionImage,
rma::include,genes,specimen(donor(age)),plane_of_section,section_images
criteria,[data_set_id$eq70813257]

All Mouse Brain ISH exeriments in comma delimited format

Code Block
http://api.brain-map.org/api/v2/data/query.csv?criteria=
model::SectionDataSet,
rma::criteria,[failed$eqfalse],products[abbreviation$eq'Mouse'],treatments[name$eq'ISH'],genes,plane_of_section,
rma::options,
[tabular$eq'plane_of_sections.name+as+plane','genes.acronym+as+gene','data_sets.id+as+section_data_set_id'],
[order$eq'plane_of_sections.name,genes.acronym,data_sets.id']
&num_rows=50&start_row=0

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