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DOWNLOADING 3-D EXPRESSION GRID DATA

Table of Contents
minLevel2
maxLevel3
stylenone
classtoc-style

Download 3-D expression grid data packaged into a compressed archive file (.zip).

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No Format
http://api.brain-map.org/grid_data/download_file/69816930

Download the 200um energy and intensity volumes for Mouse Brain Atlas SectionDataSet 69816930:

No Format
http://api.brain-map.org/grid_data/download_file/183282970?include=energy,intensity

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DOWNLOADING 3-D PROJECTION GRID DATA

Table of Contents
minLevel2
maxLevel3
stylenone
classtoc-style

Download 3-D expression grid data packaged into a compressed archive file (.zip).

...

No Format
http://api.brain-map.org/grid_data/download/[SectionDataSet.id]&include=[images]

Examples

Download the 200um 100um density volume for the Mouse Brain Connectivity Atlas SectionDataSet 69816930181777177:

No Format
http://api.brain-map.org/grid_data/download_file/69816930181777177

Download the 200um energy and intensity volumes 25um injection volume for Mouse Brain Connectivity Atlas SectionDataSet 69816930181777177:

No Format
http://api.brain-map.org/grid_data/download_file/183282970181777177?include=energy,intensity

Download the energy volume for the Mouse Brain Atlas' coronal Adora2a experiment.

    First, search for relevant experiments' IDs (SectionDataSets):

No Format

http://api.brain-map.org/api/v2/data/query.xml?criteria=
model::SectionDataSet,
rma::criteria,[failed$eq'false'],products[abbreviation$eq'Mouse'],plane_of_section[name$eq'coronal'],genes[acronym$eq'Adora2a']

    Then, download the energy volume for each of the experiments' IDs:

No Format

http://api.brain-map.org/grid_data/download/72109410?image=energy
image=injection&resolution=25

Parameters

filename

Integer

ID of the desired SectionDataSet.

image

String

Explicitly choose the desired image volume. Valid volumes are energy and density. An additional volume of injection is available for projection SectionDataSets. 

resolution

Integer

For projection data, available resolutions are 10, 25, 50, and 150 (in microns). For adult mouse gene expression SectionDataSets, only 200um resolution data is available and will be returned regardless of the input value.

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