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With the initial launch of the Allen Cell Types Database, we include electrophysiological recordings from 248 individual cells,


Mouse Lines

Whole cell current clamp recordings were made from cells expressing the fluorescent molecule, tdTomato. Fluorescent cells were cre-positive cells from one of the transgenic lines described below.

Rorb-IRES2-Cre-Strong expression in the zonal layer of the superior colliculus and subregions of thalamus. Dense, patchy expression in layer 4 and sparse expression in layer 5 and 6 in cortex. Also expressed in trigeminal nucleus and small patches of cells in cerebellum. View transgenic characterization.
Scnn1a-Tg2-Cre-Reporter expression in sparse and/or restricted regions of cortex (layer 4), thalamus, midbrain, medulla, pons, and cerebellum. View transgenic characterization.
Scnn1a-Tg3-Cre-Enriched in cortical layer 4 and in restricted populations within cortex, thalamus, and in cerebellum. View transgenic characterization.
Nr5a1-Cre-Expressed in restricted populations within the hypothalamus (ventromedial hypothalamus), and in cortical layer 4. View transgenic characterization.
Rbp4-Cre_KL100-Enriched in cortical layer 5 and the dentate gyrus. View transgenic characterization.
Ntsr1-Cre-Specific to cortical layer 6 neurons. View transgenic characterization.
Sst-IRES-Cre-Strong scattered expression throughout the brain. Localized areas of enrichment include restricted populations in thalamus, amygdala, midbrain, hindbrain, cortical subplate, and Purkinje cell layer. View transgenic characterization.
Pvalb-IRES-Cre-Expressed in restricted and/or sparse populations within the cerebellum, medulla, pons, midbrain, cortex, hippocampus, thalamus, and striatum. View transgenic characterization.
Htr3a-Cre_NO152-Reporter expression is detected in a subset of cortical interneurons. Enrichment is also detected in restricted populations within olfactory areas, pallidum, hypothalamus, pons, medulla, and cerebellum. View transgenic characterization.
Gad2-IRES-Cre-Specific to GABAergic neurons. Enriched in the striatum, piriform cortex, and within restricted populations in the thalamus, hypothalamus, cerebellum, olfactory areas, and GABAergic interneurons of the cortex. View transgenic characterization.