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BRAIN EXPLORER

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Brain Explorer® 3-D Viewer is an application for viewing brain anatomy and gene expression data in three dimensions in the framework of the Allen Reference Atlas.
Using Brain Explorer, you can:

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To load an experiment for viewing click on the "Download" button under the gene name.

Toolbar

Button

Operation

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Selects cursor rotation tool mode

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Selects cursor pan tool mode

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Selects cursor selection tool mode

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Toggle Sagittal Atlas section viewing

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Toggle Coronal Atlas section viewing

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Toggle Horizontal Atlas section viewing

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Centers the Viewer on the current pinpointed expression data point

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Turns on the cutting planes

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Toggles the Structure Ontology and Gene List View

Advanced Features

Atlas Menu:

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