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Data

Description

average_template

USHORT(16 bit) anatomical template of CCFv3 - a shape and intensity average of 1675 specimen brains

ara_nissl

FLOST FLOAT(32 bit) reconstructed Allen Reference Atlas Nissl deformably registered to the anatomical template of CCFv3

annotation/ccf_2015

UINT (32bit) structure gray matter and fiber tract annotation of CCFv3

annotation/mouse_2011

UINT (32bit) structure annotation extracted from the coronal Allen Reference Atlas and deformably registered to CCFv3

annotation/devmouse_2012

UINT (32bit) structure annotation extracted from the P56 Allen Developing Mouse Brain Reference Atlas and deformably registered to CCFv3

Each file is available in multiple pixel resolutions:

All volumetric data is compressed NRRD (Nearly Raw Raster Data) format. The raw numerical data is stored as a 1-D array raster as shown in the figure below.

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