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Warning

3-D annotation volumes were updated in the October 2016 2017 release to include newly drawn structures in the Allen Mouse Common Coordinate Framework (CCFv3).

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Data

Description

average_template

USHORT(16 bit) anatomical template of CCFv3 - a shape and intensity average of 1675 specimen brains

ara_nissl

FLOAT(32 bit) reconstructed Allen Reference Atlas Nissl deformably registered to the anatomical template of CCFv3

annotation/ccf_2017UINT (32 bit) structure gray matter and fiber tract annotation of CCFv3 (October 2017)

annotation/ccf_2016

UINT (32 bit) structure gray matter and fiber tract annotation of CCFv3 (October 2016)

annotation/ccf_2015

UINT (32 bit) structure gray matter and fiber tract annotation of CCFv3 (May 2015)

annotation/mouse_2011

UINT (32 bit) structure annotation extracted from the coronal Allen Reference Atlas and deformably registered to CCFv3

annotation/devmouse_2012

UINT (32 bit) structure annotation extracted from the P56 Allen Developing Mouse Brain Reference Atlas and deformably registered to CCFv3

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