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The output of the source search is a xml list of objects. Each object represents one experiment and contains information about the experiment including identifier, the primary injection structure, list of any secondary injection structures, injection coordinates, injection volume and transgenic line name.

Image Added

Figure: Screenshot of source search results in the web application for experiments with injection in the isocortex. The injection location of each experiment is shown as a sphere on the 3D injection map.

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To perform a  Target Search, the user specifies a set of target structures. The service returns a rank list of experiments by signal volume in the target structures which are above a minimum threshold. The target structure specification can be further refined by hemisphere. The search results can also be filtered by a list of source structures and/or list of transgenic lines.

See the connected service page for definitions of service::mouse_connectivity_injection_structure parameters.

Example:

  • Target search for experiments with projection signal in the target structure LGd (dorsal part of the lateral geniculate complex) and injection in the isocortex
    Code Block
    
    http://api.brain-map.org/api/v2/data/query.xml?criteria=
    service::mouse_connectivity_injection_structure[injection_domain$eqIsocortex][target_domain$eqLGd]
    

The output of the target search is a xml list of objects. Each object represents one experiment and contains information about the experiment including identifier, the primary injection structure, list of any secondary injection structures, injection coordinates, injection volume and transgenic line name. Additionally, the total signal volume and number of voxels spanned by the target structure(s) is also reported.

Figure: Screenshot of source search results in the web application for experiments with projection in target structure LGd (dorsal part of the lateral geniculate complex) and injection in the isocortex. The injection location of each experiment is shown as a sphere on the 3D injection map.

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