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  • Find Structure ID for "neural plate" (id = 10153)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Structure,
    rma::criteria,[name$il'neural plate'],ontology[name$eq'Developing Human Brain Atlas'],
    rma::options[only$eq'structures.id']
    
  • Find Donor IDs for donors within age 8-9 pcw (id = 12833,13058)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Donor,
    rma::criteria,products[name$eq'Developing Human Transcriptome'],age[embryonic$eqtrue][days$ge56][days$le63],
    rma::options[only$eq'donors.id']
    
  • Find Donor IDs for donors within age 10-12 pcw (id = 12835,12960,13060)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Donor,
    rma::criteria,products[name$eq'Developing Human Transcriptome'],age[embryonic$eqtrue][days$ge56days$ge70][days$le63days$le77],
    rma::options[only$eq'donors.id']
    
  • Differential search for gene-level RNA-Seq data (set = rna_seq_genes)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::dev_human_differential
    [set$eq'rna_seq_genes'][donors1$eq12835,12960,13060][donors2$eq12833,13058]
    [structures1$eq10153][structures2$eq10153][sort_by$eq'fold-change']
    
  • Differential search for exon-level RNA-Seq data (set = rna_seq_exons )
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::dev_human_differential
    [set$eq'rna_seq_exons'][donors1$eq12835,12960,13060][donors2$eq12833,13058]
    [structures1$eq10153][structures2$eq10153][sort_by$eq'fold-change']
    
  • Differential search for gene-level exon microarray data (set = exon_microarray_genes )
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::dev_human_differential
    [set$eq'exon_microarray_genes'][donors1$eq12835,12960,13060][donors2$eq12833,13058]
    [structures1$eq10153][structures2$eq10153][sort_by$eq'fold-change']
    
  • Differential search for probeset-level exon microarray data (set = exon_microarray_exons )
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::dev_human_differential
    [set$eq'exon_microarray_exons'][donors1$eq12835,12960,13060][donors2$eq12833,13058]
    [structures1$eq10153][structures2$eq10153][sort_by$eq'fold-change']
    

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