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  • Find Donor ID for "H0351.1015" (id = 15496)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Donor,
    rma::criteria,[name$eq'H0351.1015'],
    rma::options[only$eq'donors.id']
    
  • Find Structure ID for "locus ceruleus" (id = 9148)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Structure,
    rma::criteria,[name$il'locus ceruleus'],ontology[name$eq'Human Brain Atlas'],
    rma::options[only$eq'structures.id']
    
  • Find Probes associated with gene SLC6A2 (id = 1023146,1023147 )
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Probe,
    rma::criteria,[probe_type$eq'DNA'],products[abbreviation$eq'HumanMA'],gene[acronym$eq'SLC6A2'],
    rma::options[only$eq'probes.id']
    
  • Use Donor, Structure and Probe IDs as parameters to the connected service
    Code Block
    http://api.brain-map.org/api/v2/data/query.json?criteria=
        service::human_microarray_expression[probes$eq1023146,1023147][donors$eq15496][structures$eq9148]
    

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  • Find Structure ID for "thalamus" (id = 4392)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Structure,
    rma::criteria,[name$il'thalamus'],ontology[name$eq'Human Brain Atlas'],
    rma::options[only$eq'structures.id']
    
  • Find Structure ID for "cerebral cortex" (id = 4008)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Structure,
    rma::criteria,[name$il'cerebral cortex'],ontology[name$eq'Human Brain Atlas'],
    rma::options[only$eq'structures.id']
    
  • Use Structure IDs as parameters to the connected service
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::human_microarray_differential
        [structures1$eq4008][structures2$eq4392][sort_by$eq'fold-change']
    
  • Visualize the same search result in the Web application 

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  • Find Probe ID for probe "CUST_11451_PI416261804" (id = 1052410)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Probe,
    rma::criteria,[name$eq'CUST_11451_PI416261804'],
    rma::options[only$eq'probes.id']
    
  • Find Structure ID for "Brain" (id = 4005)
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=model::Structure,
    rma::criteria,[name$il'brain'],ontology[name$eq'Human Brain Atlas'],
    rma::options[only$eq'structures.id']
    
  • Use Probe and Structure IDs as parameters to the connected service
    Code Block
    http://api.brain-map.org/api/v2/data/query.xml?criteria=service::human_microarray_correlation
        [probes$eq1052410][structures$eq4005]
    
  • Visualize the same search result in the Web application

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