...

From the API, detailed information about SectionDataSets, SectionImages, Injections and TransgenicLines can be obtained using RMA queries.

Examples:

• [All experiments in the "Mouse Connectivity Projection" Product|http://api.brain-map.org/api/v2/data/query.xml?criteria= model::SectionDataSet, rma::criteria,productsid$eq5, rma::include,specimen(stereotaxic_injections(primary_injection_structure))][
• All experiments with an injection in the primary visual area (VISp, structure_id=385)|http://api.brain-map.org/api/v2/data/query.xml?criteria= model::SectionDataSet, rma::criteria,productsid$eq5, rma::include,specimen(stereotaxic_injections(primary_injection_structure,structuresid$eq385))][id=385)
• Detailed metadata for one experiment with injection in the VISp (id=126862385) |(http://api.brain-map.org/api/v2/data/query.xmlcsv?criteria=model::SectionDataSet,rma::criteria,[id$eq126862385],rma::include,specimen\(stereotaxic_injections\(primary_injection_structure,structures,stereotaxic_injection_coordinates)structures[id$eq385]\)\),equalization,sub_images,rma::options[order$eq'sub_images.section_number$asc'])

Figure: Projection dataset (id=126862385) with injection in the primary visual area (VISp) as visualized in the web application image viewer.

...

• Source search for experiments with injection in the isocortex

  No Format
  http://api.brain-map.org/api/v2/data/query.jsonxml?criteria= service::mouse_connectivity_injection_structure[injection_structures$eqIsocortex][primary_structure_only$eqtruedomain$eqIsocortex]

• Source search for experiments performed on wild-type specimens and with injection in the isocortex

  No Format
  http://api.brain-map.org/api/v2/data/query.jsonxml?criteria= service::mouse_connectivity_injection_structure[injection_structures$eqIsocortexdomain$eqIsocortex][transgenic_lines$eq0][primary_structure_only$eqtrue]

• Source search for experiments performed on Syt6-Cre_KI148 cre-line specimens and with injection in the isocortex

  No Format
  http://api.brain-map.org/api/v2/data/query.jsonxml?criteria= service::mouse_connectivity_injection_structure[injection_structures$eqIsocortexdomain$eqIsocortex][transgenic_lines$eq'Syt6-Cre_KI148'][primary_structure_only$eqtrue]

• Visualize source search in the web application

...

• Target search for experiments with projection signal in the target structure LGd (dorsal part of the lateral geniculate complex) and injection in the isocortex

  No Format
  http://api.brain-map.org/api/v2/data/query.jsonxml?criteria= service::mouse_connectivity_injection_structure[injection_structures$eqIsocortex][primary_structure_only$eqtruedomain$eqIsocortex][target_domain$eqLGd]

• Visualize the same search in the web application

...