API: Mouse Connectivity Resources
Mouse Connectivity Projection Data: Informatics Data Processing Pipeline------------------------------------------------------------------------
The primary data of the [Allen Mouse Brain Connectivity Atlas](http://connectivity.brain-map.org/
) consists of high-resolution images of axonal projections
targeting different anatomic regions or various cell types using Cre-dependent specimens. The informatics data processing pipeline
produces results that enable the navigation, analysis and visualization of this data.
The output of the pipeline is quantified signal values at a grid voxel level and at a structure level according
to the integrated reference atlas ontology. The grid level data are used downstream to provide an on-the-fly data and search service
and to support visualization of spatial relationships.
Refer to the [informatics whitepaper](http://help.brain-map.org/display/mouseconnectivity/Documentation) for detailed methods used in the pipeline.