Atlas Drawings and Ontologies
A set of high resolution digital reference atlases have been created to provide neuroanatomical context to the in situ hybridization and axonal projection data.
From the API, you can:
- Download the underlying high resolution histological images
- Download the colorized and label atlas images
- Download atlas drawings in SVG (scalable vector graphics) format
- Download the associated structural ontology
The following atlases are available through the API
Atlas ID |
Atlas Name |
Image Type |
Ontology |
StructureGraph ID |
GraphicGroupLabels |
||
|---|---|---|---|---|---|---|---|
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1 |
"Mouse, P56 Coronal" |
"Atlas - Adult Mouse" |
"Mouse Brain Atlas" |
1 |
[28,159226751] |
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2 |
"Mouse, P56 Sagittal" |
"Atlas - Adult Mouse" |
"Mouse Brain Atlas" |
1 |
[28] |
]]></ac:plain-text-body></ac:structured-macro> |
181276165 |
"Developing Mouse, P56" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181276164 |
"Developing Mouse, P14" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181276162 |
"Developing Mouse, P4" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181276160 |
"Developing Mouse, E18.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181276151 |
"Developing Mouse, E15.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181276130 |
"Developing Mouse, E13.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
181275741 |
"Developing Mouse, E11.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
|
||
138322605 |
"Human, 34 yrs" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
17 |
|
||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6ca41323-08de-4298-a92e-748bdaf77e0a"><ac:plain-text-body><![CDATA[ |
3 |
"Human, 21 pcw" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
16 |
[31] |
]]></ac:plain-text-body></ac:structured-macro> |
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138322603 |
"Human, 15 pcw" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
16 |
[31] |
]]></ac:plain-text-body></ac:structured-macro> |