Atlas Drawings and Ontologies
A set of high resolution digital reference atlases have been created to provide neuroanatomical context to the in situ hybridization and axonal projection data.
From the API, you can:
- Download the underlying high resolution histological images
- Download the colorized and label atlas images
- Download atlas drawings in SVG (scalable vector graphics) format
- Download the associated structural ontology
The following atlases are available through the API
Atlas ID |
Atlas Name |
Image Type |
Ontology |
StructureGraph ID |
GraphicGroupLabels |
||
|---|---|---|---|---|---|---|---|
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="79b89e17-e43d-45bb-a66b-19ee51aa590a"><ac:plain-text-body><![CDATA[ |
1 |
"Mouse, P56 Coronal" |
"Atlas - Adult Mouse" |
"Mouse Brain Atlas" |
1 |
[28,159226751] |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1c9979eb-7723-4ede-b74d-bb0b9c5a5474"><ac:plain-text-body><![CDATA[ |
2 |
"Mouse, P56 Sagittal" |
"Atlas - Adult Mouse" |
"Mouse Brain Atlas" |
1 |
[28] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="72aa59a9-b775-4da0-ada7-4248b5d3d548"><ac:plain-text-body><![CDATA[ |
181276165 |
"Developing Mouse, P56" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9628fbe9-f32a-4ca3-9daf-b20709066eac"><ac:plain-text-body><![CDATA[ |
181276164 |
"Developing Mouse, P14" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32,167675952] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="3b565a73-8f0f-41a9-ab62-1033e7e8d89f"><ac:plain-text-body><![CDATA[ |
181276162 |
"Developing Mouse, P4" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="57d30c11-0f75-48ee-96e9-1168132c83ce"><ac:plain-text-body><![CDATA[ |
181276160 |
"Developing Mouse, E18.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="54ac8929-5d7b-4c93-acc7-2f9c5fdfec00"><ac:plain-text-body><![CDATA[ |
181276151 |
"Developing Mouse, E15.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ef7890d0-602d-41ca-b2ba-996e923a2716"><ac:plain-text-body><![CDATA[ |
181276130 |
"Developing Mouse, E13.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="25581769-52fb-41f5-9f1f-c156c94c317b"><ac:plain-text-body><![CDATA[ |
181275741 |
"Developing Mouse, E11.5" |
"Atlas - Developing Mouse" |
"Developing Mouse Brain Atlas" |
17 |
[32,126768961] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="e0d79c5c-4628-44fd-a16e-7f8b2aa5fb2c"><ac:plain-text-body><![CDATA[ |
138322605 |
"Human, 34 yrs" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
17 |
[31,113753815,113753816] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="457cdbcc-25d4-4306-9bcf-c22523eeec93"><ac:plain-text-body><![CDATA[ |
3 |
"Human, 21 pcw" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
16 |
[31] |
]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="e6c3edc6-7753-46ad-8d8e-7464f1d1549d"><ac:plain-text-body><![CDATA[ |
138322603 |
"Human, 15 pcw" |
"Atlas - Developing Human" |
"Developing Human Brain Atlas" |
16 |
[31] |
]]></ac:plain-text-body></ac:structured-macro> |