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Atlas Drawings and Ontologies

A set of high resolution digital reference atlases have been created to provide neuroanatomical context to the in situ hybridization and axonal projection data.

From the API, you can:

  • Download the underlying high resolution histological images
  • Download the colorized and label atlas images
  • Download atlas drawings in SVG (scalable vector graphics) format
  • Download the associated structural ontology

The following atlases are available through the API

Atlas ID

Atlas Name

 

Image Type

Ontology

StructureGraph ID

GraphicGroupLabels

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a2d34731-384e-44c5-aaca-94e60c006a1b"><ac:plain-text-body><![CDATA[

1

"Mouse, P56  Coronal"

 

"Atlas - Adult Mouse"

"Mouse Brain Atlas"

1

[28,159226751]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1f0ad24d-e566-482a-bc62-a3def444788a"><ac:plain-text-body><![CDATA[

2

"Mouse, P56 Sagittal"

 

"Atlas - Adult Mouse"

"Mouse Brain Atlas"

1

[28]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="db90f717-1619-419e-99c8-6984311d68d1"><ac:plain-text-body><![CDATA[

181276165

"Developing Mouse, P56"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="fdc579e8-a59c-4a66-9c31-07012d505758"><ac:plain-text-body><![CDATA[

181276164

"Developing Mouse, P14"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32,167675952]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="77a227ff-a80d-479a-aefe-30e1c13ce135"><ac:plain-text-body><![CDATA[

181276162

"Developing Mouse, P4"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="f6cd005c-452a-4d33-b581-dec54d6aa595"><ac:plain-text-body><![CDATA[

181276160

"Developing Mouse, E18.5"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="45298393-e3b9-4969-ac85-bab0b6f0f260"><ac:plain-text-body><![CDATA[

181276151

"Developing Mouse, E15.5"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="72cad61f-fdfe-4080-9ffc-d51a288166e5"><ac:plain-text-body><![CDATA[

181276130

"Developing Mouse, E13.5"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a5761c02-8420-4df4-92ae-dd7c2d4da0dc"><ac:plain-text-body><![CDATA[

181275741

"Developing Mouse, E11.5"

 

"Atlas - Developing Mouse"

"Developing Mouse Brain Atlas"

17

[32,126768961]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="fd2a7b52-597b-4a6c-8bfa-ba86e0b9c529"><ac:plain-text-body><![CDATA[

138322605

"Human, 34 yrs"

 

"Atlas - Developing Human"

"Developing Human Brain Atlas"

17

 [31,113753815,113753816]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="2229cb60-215d-4912-a2ab-46d26b453d6d"><ac:plain-text-body><![CDATA[

3

"Human, 21 pcw"

 

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31]

]]></ac:plain-text-body></ac:structured-macro>

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="582d5752-5854-4e20-b0b3-ef8193666cd3"><ac:plain-text-body><![CDATA[

138322603

"Human, 15 pcw"

 

"Atlas - Developing Human"

"Developing Human Brain Atlas"

16

[31]

]]></ac:plain-text-body></ac:structured-macro>

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