How To
Ivy Glioblastoma Atlas Project This is the online help for the Ivy Glioblastoma Atlas Project web application. Brain Knowledge Platform The Brain Knowledge Platform is a data platform and website for researchers to access data, explore features and visualizations, and connect data to knowledge. This product is an active area of development for the Allen Institute for Brain Science, and new features are released regularly. Allen Developing Mouse Brain Atlas Allen Brain Cell (ABC) Atlas MapMyCells Reference Atlases This is the online help for the ALLEN Reference Atlases and the web-based tools that can be used to access them. The reference atlases are neuroanatomical guides to accompany Allen Institute data and are also useful as stand-alone resources. Allen Mouse Brain Atlas This is the online help for the ALLEN Mouse Brain Atlas web application. Allen Human Brain Atlas Aging, Dementia and Traumatic Brain Injury Project The Aging, Dementia and Traumatic Brain Injury Project is a detailed neuropathological, molecular and transcriptomic characterization of brains of control and TBI exposure cases from a unique, population-based aged cohort from the Adult Changes in Thought (ACT) study of aging and dementia. NIH Blueprint Non-Human Primate (NHP) Atlas This is the online help for the NIH Blueprint Non-Human Primate Atlas (NHP) web application. Allen Cell Types Database Allen Mouse Brain Connectivity Atlas Brainspan Atlas of the Developing Human Brain Allen Brain Explorer Allen Brain Observatory This is the online help for the Allen Brain Observatory - Visual Coding web application. Allen Brain Atlas API
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| About the How To category |
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0 | 543 | May 24, 2021 |
| Human Brain Atlas: Microarray Data Download |
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3 | 175 | April 16, 2024 |
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Documentation: BrainSpan Atlas of the Developing Human Brain
Documentation for BrainSpan Document Description Developmental Transcriptome Overview of methods for transcriptome profiling Prenatal LMD Microarray Overview of methods for prenatal laser microdissection microa… |
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5 | 484 | April 10, 2024 |
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ABC Atlas User Guide
The ABC Atlas aims to empower researchers worldwide to explore and analyze multiple whole-brain datasets simultaneously. As the Allen Institute and its collaborators continue to add new modalities, species, and insights … |
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1 | 336 | March 21, 2024 |
| ABC Atlas: Example Use Cases (Whole Human Brain) |
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1 | 75 | April 1, 2024 |
| ABC Atlas Update Notes - March 26, 2004 |
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1 | 70 | March 31, 2024 |
| Map cells to their cell type |
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2 | 101 | March 29, 2024 |
| How to get all the raw slice data that was used for the Allen mouse brain Atlass |
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5 | 181 | March 27, 2024 |
| Mapping to Brain region |
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2 | 121 | March 26, 2024 |
| New Whole Human Brain Data Explorable in the ABC Atlas |
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0 | 85 | March 25, 2024 |
| API for Mouse Brain Atlas |
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0 | 870 | December 8, 2023 |
| ABC Atlas Update Notes - March 13, 2024 |
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0 | 150 | March 12, 2024 |
| H5 to h5ad conversion help |
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5 | 180 | March 12, 2024 |
| API: Allen Brain Connectivity |
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2 | 480 | March 8, 2024 |
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How to: Allen Human Brain Atlas
This is the online help for the Allen Human Brain Atlas web application. The Dataset The Allen Human Brain Atlas is a unique multi-modal atlas of the human brain, integrating anatomic and genomic information and coupled… |
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2 | 449 | March 6, 2024 |
| Accessing raw images from patch-seq morphological reconstructions |
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4 | 204 | March 4, 2024 |
| Data Updates - December 13, 2023 |
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8 | 269 | March 4, 2024 |
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Cell Types Database: How to
Allen Cell Types Database This is the online help for the Allen Cell Types Database web application. The Dataset The Allen Cell Types Database contains a multimodal characterization of single brain cells by electrophysi… |
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8 | 347 | March 2, 2024 |
| ABC Atlas Update Notes - February 27, 2024 |
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0 | 105 | February 26, 2024 |
| Access to raw (bam or fastq) Smart-seq2 human cortex scRNA-seq |
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2 | 124 | February 27, 2024 |
| Cell Types Database: Physiology and Morphology |
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2 | 601 | February 26, 2024 |
| What is a glif_sdk? |
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5 | 120 | February 26, 2024 |
| What does cell reporter status indicate? |
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2 | 114 | February 26, 2024 |
| Relative size of microarray samples compared to cortical ribbon |
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2 | 195 | February 23, 2024 |
| MapMyCells Update Notes - February 15, 2024 |
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2 | 256 | February 16, 2024 |
| API for Ivy Glioblastoma Atlas Project |
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0 | 125 | February 5, 2024 |
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Documentation for NHP Atlas
Document Description In Situ Hybridization Overview of methods for ISH studies Gene List Complete list of ISH genes and corresponding anatomical structure(s) with ISH data available Microarray Analysis Overvi… |
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1 | 126 | February 22, 2024 |
| In Situ Hybridization (ISH) Data for Ivy Glioblastoma Atlas Project |
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0 | 124 | February 5, 2024 |
| ABC Atlas User Guide: Visualization Frames |
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0 | 700 | July 8, 2023 |
| ABC Atlas User Guide: Tools |
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0 | 1267 | July 8, 2023 |